 |
Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
860911 |
| Common Name | ARALYDRAFT_660355 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
| Family |
C2H2 |
| Protein Properties |
Length: 314aa MW: 34760.5 Da PI: 6.4471 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 860911 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 13.9 | 0.00016 | 261 | 281 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21
+ C+ C+++F++ + L++H +
860911 261 FGCKSCTRTFTSEMGLQSHTK 281
56*****************76 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MFMIHAKNSS KSRHKRPRIV LSLTNLNVLC LTKCVEVRNG PAHHIYPGEG RPLITRDDQP 60
YVHFISQVAL GENQNNGTEP IQLYLIVGSA KRLIGTLSHE RFPQLATAIV LERHFSLSHT 120
WKNGSVFFSD DVIDVDGHDD YDDCDFEDSG EEEEEKLTAE PDSEEDDEDD SSDDEVDDSS 180
EEETPKKPEA SKKRSAEANS SKNPAPNKKA KFETPQKTDS KKPHVHVATP HPSKQAGKNS 240
GGSSIGETSK QQQTPKSAGA FGCKSCTRTF TSEMGLQSHT KGQTQCSCLK RRRSSLMTTL 300
YNIYSRTLMS FGT*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AF372889 | 0.0 | AF372889.1 Arabidopsis thaliana AT5g03740/F17C15_160 mRNA, complete cds. |
